i2025”Nj
25-1) Haga, K. and Fukuda, M. (2025) Comprehensive knockout analysis of the
RAB family small GTPases reveals an overlapping role of RAB2 and RAB14 in
autophagosome maturation. Autophagy 21, 21–36 [PubMed]
(Selected as a cover of the
issue!)
25-2) Hata, R., Sugawara, A. and Fukuda, M. (2025) Rab10 function in tubular
endosome formation requires the N-terminal K3 residue and is disrupted by
N-terminal tagging. J. Cell Sci. 138,
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25-3) Nakashima, S. and Fukuda, M. (2025) Identification of Rab
GTPase-activating proteins required for tubular endosome formation. Traffic
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i2024”Nj
24-1) Sazki-Hagenbach, P., Kleeblatt, E., Fukuda, M., Ali, H. and
Sagi-Eisenberg, R. (2024) The underlying Rab network of MRGPRX2-stimulated
secretion unveils the impact of receptor trafficking on secretory granule
biogenesis and secretion. Cells 13, 93 [PubMed]
24-2) Nakamura, H. and Fukuda, M. (2024) Establishment of a synchronized tyrosinase transport system revealed a role of Tyrp1 in efficient melanogenesis by promoting tyrosinase targeting to melanosomes. Sci. Rep. 14, 2529 [PubMed]
24-3) Omari, S., Roded, A., Eisenberg, M., Ali, H., Fukuda, M., Galli, S. J. and Sagi-Eisenberg, R. (2024) Mast cell secretory granule fusion with amphisomes coordinates their homotypic fusion and release of exosomes. Cell Rep. 43, 114482 [PubMed]
i2023”Nj
23-1) Shikanai, M., Ito, S., Nishimura, Y., Akagawa, R., Fukuda, M., Yuzaki,
M., Nabeshima, Y. and Kawauchi, T. (2023) Rab21 regulates caveolin-1-mediated
endocytic trafficking to promote immature neurite pruning. EMBO Rep. 24, e51475 [PubMed]
23-2) Nakashima, S., Matsui, T. and Fukuda, M. (2023) Vps9d1 regulates
tubular endosome formation through specific activation of Rab22A. J. Cell Sci.
136, jcs260522 [PubMed]
23-3) Ishiyama, S., Hasegawa, T.,
Sugeno, N., Kobayashi, J., Yoshida, S., Miki, Y., Wakabayashi, K., Fukuda, M.,
Kawata, Y., Nakamura, T., Sato, K., Ezura, M., Kikuchi, A., Takeda, A. and Aoki,
M. (2023) Sortilin acts as an endocytic receptor for ƒ¿-synuclein
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23-4) Komori, T., Kuwahara, T., Fujimoto, T., Sakurai, M., Koyama-Honda, I., Fukuda, M. and Iwatsubo, T. (2023) Phosphorylation of Rab29 at Ser185 regulates its localization and role in the lysosomal stress response in concert with LRRK2. J. Cell Sci. 136, jcs.261003 [PubMed]
23-5) Brauer, N., Maruta, Y., Strege, K., Oschlies, I., Nakamura, H., Lisci, M., Böhm, S., Lehmberg, K., Brandhoff, L., Hennies, H. C., Ehl, S. R. Parvaneh, N., Kappler, W., Fukuda, M., Griffiths, G. M., Niehues, T. and Ammann, S. K. (2023) Immunodeficiency with susceptibility to lymphoma with complex genotype affecting energy metabolism (FBP1, ACAD9) and vesicle trafficking (RAB27A). Front. Immunol. 14, 1151166 [PubMed]
23-6) Noda, K., Lu, S.-L., Chen, S., Tokuda, K., Li, Y., Hao, F., Wada, Y., Sun-Wada, G.-H., Murakami, S., Fukuda, M., Itoh, T. and Noda, T. (2023) Characterization of Rab32- and Rab38-positive lysosome-related organelles in osteoclasts and macrophages. J. Biol. Chem. 299, 105191 [PubMed]
23-7) Matsui, T., Sakamaki, Y., Hiragi, S. and Fukuda, M. (2023) VAMP5 and distinct sets of cognate Q-SNAREs mediate exosome release. Cell Struct. Funct. 48, 187–198 [PubMed]
23-8) Tokuda, K., Lu, S.-L., Zhang, Z., Kato, Y., Chen, S., Noda, K., Hirose, K., Usami, Y., Uzawa, N., Murakami, S., Toyosawa, S., Fukuda, M., Sun-Wada, G.-H., Wada, Y. and Noda T. (2023) Rab32 and Rab38 maintain bone homeostasis by regulating intracellular traffic in osteoclasts. Cell Struct. Funct., 48, 223–239 [PubMed]
23-9) Rios, J. J., Li, Y., Paria, N., Bohlender, R. J., Huff, C., Rosenfeld,
J. A., Liu, P., Bi, W., Haga, K., Fukuda, M., Vashisth, S., Kaur, K., Chahrour,
M., Bober, M. B., Duker, A. L., Ladha, F. A., Hanchard, N. A., Atala, K.,
Khanshour, A. M., Smith, L., Wise, C. A. and Delgado, M. R. (2023) RAB1A haploinsufficiency phenocopies the
2p14-p15 microdeletion and is associated with impaired neuronal differentiation.
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i2022”Nj
22-1) Oguchi, M. E., Homma, Y. and Fukuda, M. (2022) The N-terminal Leu-Pro-Gln sequence of Rab34 is required for ciliogenesis in hTERT-RPE1 cells. Small GTPases 13, 77-83 [PubMed]
22-2) Matsui, T., Sakamaki, Y., Nakashima, S. and Fukuda, M. (2022) Rab39 and
its effector UACA regulate basolateral exosome release from polarized
epithelial cells. Cell Rep. 39, 110875 [PubMed]
22-3) Naß, J., Koerdt, S. N.,
Biesemann, A., Chehab, T., Yasuda, T., Fukuda, M., Martín-Belmonte,
F. and Gerke, V. (2022) Tip-end fusion of a rod-shaped secretory organelle. Cell. Mol. Life
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22-4) Hiragi, S., Matsui, T., Sakamaki, Y. and Fukuda, M. (2022) TBC1D18 is a
Rab5-GAP that coordinates endosome maturation together with Mon1. J. Cell Biol.
221, e202201114 [PubMed]
22-5) Maruta, Y. and Fukuda, M. (2022) Large Rab GTPase Rab44 regulates
microtubule-dependent retrograde melanosome transport in melanocytes. J. Biol. Chem.
298, 102508 [PubMed]
22-6) Nishizawa, A., Maruta, Y. and Fukuda, M. (2022) Rab32/38-dependent and
-independent transport of tyrosinase to melanosomes in B16-F1 melanoma cells. Int. J. Mol. Sci.
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i2021”Nj
21-1) Urrutia, P. J., Bodaleo, F., Bórquez, D. A., Homma, Y., Rozes-Salvador, V., Villablanca, C., Conde, C., Fukuda, M. and González-Billault, C. (2020) Tuba activates Cdc42 during neuronal polarization downstream of the small GTPase Rab8a. J. Neurosci. 41, 1636-1649 [PubMed]
21-2) Matsui, T., Osaki, F., Hiragi, S., Sakamaki, Y. and Fukuda, M. (2020) ALIX and ceramide differentially control polarized small extracellular vesicle release from epithelial cells. EMBO Rep. 22, e51475 [PubMed]
21-3) Osaki, F., Matsui, T., Hiragi, S., Homma, Y. and Fukuda, M. (2021)
RBD11, a bioengineered Rab11-binding module for visualizing and analyzing endogenous
Rab11. J. Cell Sci. 134, jcs257311 [PubMed]
21-4) Homma, Y. and Fukuda, M. (2021) Knockout analysis of Rab6 effector proteins revealed the role of VPS52 in the secretory pathway. Biochem. Biphys. Res. Common. 561, 151-157 [PubMed]
21-5) Omar, J., Rosenbaum, E., Efergan, A., Abu
Sneineh, B., Yeheskel, A., Maruta, Y. Fukuda, M. and Sagi-Eisenberg, R. (2021)
Biochemical and structural insights into Rab12 interactions with RILP and its
family members. Sci.
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21-6) Ganga, A. K., Kennedy, M. C., Oguchi, M. E., Gray, S. D., Oliver, K.
E., Knight, T. A., De La Cruz, E. M., Homma, Y., Fukuda, M. and Breslow, D. K.
(2021) Rab34 GTPase mediates ciliary membrane formation in the intracellular
ciliogenesis pathway. Curr. Biol. 31, 2895-2905 [PubMed]
21-7) Komaki, K., Takano, T., Sato, Y., Asada, A., Ikeda, S., Yamada, K.,
Wei, R., Huo, A., Fukuchi, A., Saito, T., Ando, K., Murayama, S., Araki, W.,
Kametani, F., Hasegawa, M., Iwatsubo, T., Tomomura, M., Fukuda, M., Hisanaga, S.-I.
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21-8) Trofimenko, E., Homma, Y., Fukuda, M. and Widmann, C. (2021) The
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21-9) Hatoyama, Y., Homma, Y., Hiragi, S. and Fukuda, M. (2021) Establishment and analysis of conditional Rab1- and Rab5-knockout cells using the auxin-inducible degron system. J. Cell Sci. 134, jcs259184 [PubMed]
i2020”Nj
20-1) Dolce, L. G.,
Ohbayashi, N., da Silva, D. F. C., Ferrari, A. J. R., Pirolla, R. A.
S., Schwarzer, A. C. de A. P., Zanphorlin, L. M., Cabral, L., Fioramonte, M.,
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20-2) Kabayama, H., Takeuchi, M., Tokushige, N., Muramatsu, S. I., Kabayama,
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20-5) Marubashi, S. and Fukuda, M. (2020) Rab7B/42 is functionally involved in protein degradation on melanosomes in keratinocytes. Cell Struct. Funct. 45, 45-55 [PubMed]
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20-9) Mizushima, T., Jiang, G., Kawahara, T., Li, P., Han, B., Inoue, S.,
Ide, H., Kato, I., Jalalizadeh, M., Miyagi, E., Fukuda, M., Reis, L. O. and
Miyamoto, H. (2020) Androgen receptor signaling reduces the efficacy of
Bacillus Calmette-Guérin therapy for bladder
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20-10) Kuwahara, T., Kai, F., Komori, T., Sakurai, M., Yoshii, G., Eguchi, T., Fukuda, M. and Iwatsubo, T. (2020) Roles of lysosomotropic agents on LRRK2 activation and Rab10 phosphorylation. Neurobiol. Dis. 145, 105081 [PubMed]
20-11) Bhat, S., Ljubojevic, N., Zhu, S., Fukuda, M., Echard, A. and Zurzolo C. (2020) Rab35 and its effectors promote formation of tunneling nanotubes in neuronal cells. Sci. Rep. 10, 16803 [PubMed]
20-12) Murakawa, T., Kiger, A. A., Sakamaki, Y., Fukuda, M. and Fujita, N.
(2020) An autophagy-dependent tubular lysosomal network synchronizes degradative
activity required for muscle remodeling. J. Cell Sci. 133, jcs248336
20-13) Ohishi, Y., Ammann, S., Ziaee, V., Strege, K., Groß, M., Amos, C. V., Shahrooei, M., Ashournia, P., Razaghian, An., Griffiths, G. M., Ehl, S., Fukuda, M. and Parvaneh, N. (2020) Griscelli syndrome type 2 sine albinism: unraveling differential RAB27A effector engagement. Front. Immunol. 11, 612977 [PubMed]
20-14) Yoshikawa-Murakami, C., Mizutani, Y., Ryu, A., Naru, E., Teramura, T.,
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i2019”Nj
19-1) Morishita, S., Wada, N., Fukuda,
M. and Nakamura, T. (2019) Rab5 activation on macropinosomes requires ALS2, and
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19-2) Etoh, K. and Fukuda, M. (2019) Rab10
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19-3) Takahashi, T., Minami, S.,
Tsuchiya, Y., Tajima, K., Sakai, N., Suga, K., Hisanaga, S.-I., Ohbayashi, N.,
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19-4) Ohishi, Y., Kinoshita, R.,
Marubashi, S., Ishida, M. and Fukuda, M. (2019) The BLOC-3 subunit HPS4 is
required for activation of Rab32/38 GTPases in melanogenesis, but its Rab9
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19-6) Inoue, J., Ninomiya, M.,
Umetsu, T., Nakamura, T., Kogure, T., Kakazu, E., Iwata, T., Takai, S., Sano,
A., Fukuda, M., Watashi, K., Isogawa, M., Tanaka, Y., Shimosegawa, T., McNiven,
M. A. and Masamune, A. (2019) Small interfering RNA screening for the small
GTPase Rab proteins identifies that Rab5B as a major regulator of hepatitis B
virus production.
J. Virol. 93, e00621-19 [PubMed]
19-7) Furusawa, K., Takasugi, T.,
Chiu, Y.-W., Hori, Y., Tomita, T., Fukuda, M. and Hisanaga, S.-I. (2019) CD2-associated
protein (CD2AP) overexpression accelerates amyloid precursor protein (APP)
transfer from early endosomes to the lysosomal degradation pathway. J. Biol. Chem.
294, 10886-10899 [PubMed]
19-8) Kobayashi, J., Hasegawa, T.,
Sugeno, N., Yoshida, S., Akiyama, T., Fujimori, K., Hatakeyama, H., Miki, Y.,
Tomiyama, A., Kawata, Y., Fukuda, M., Kawahata, I., Yamakuni, T., Ezura, M., Kikuchi,
A., Baba, T., Takeda, A., Kanzaki, M., Wakabayashi, K., Okano, H. and Aoki, M.
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dopamine transporter endocytosis. FASEB J. 33, 10240-10256 [PubMed]
19-9) Wei, Z., Zhang, M., Li, C.,
Huang, W., Fan, Y., Guo, J., Khater, M., Fukuda, M., Dong, Z. Hu, G. and Wu, G.
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membrane trafficking of GPCRs. Cell Rep. 28, 554-566 [PubMed]
19-10) Arango Duque, G., Jardim, A.,
Gagnon, É., Fukuda, M. and Descoteaux, A. (2019) The
host cell secretory pathway mediates the export of Leishmania virulence factors out of the parasitophorous vacuole. PLoS Pathog.
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19-11) Nishino, H., Saito, T., Wei, R.,
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i2018”Nj
18-1) Oguchi, M. E., Etoh, K. and Fukuda, M. (2018) Rab20, a
novel Rab small GTPase that negatively regulates neurite outgrowth of PC12
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18-2) Yoshida, S., Hasegawa, T., Suzuki, M., Sugeno, N., Kobayashi, J.,
Ueyama, M., Fukuda, M., Ido-Fujibayashi, A., Sekiguchi, K., Ezura, M., Kikuchi,
A., Baba, T., Takeda, A., Mochizuki, H., Nagai, Y. and Aoki, M. (2018)
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18-3) Kuchitsu, Y., Homma, Y., Fujita, N. and Fukuda, M. (2018) Rab7 knockout
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18-4) Ogawa, M., Matsuda, R., Takada, N., Tomokiyo, M., Yamamoto, S., Shizukuishi, S., Yamaji, T., Yoshikawa, Y., Yoshida, M., Tanida, I., Koike, M., Murai, M., Morita, H., Takeyama, H., Ryo, A., Guan, J.-L., Yamamoto, M., Inoue, J. I., Yanagawa, T., Fukuda, M., Kawabe, H. and Ohnishi, M. (2018) Molecular mechanisms of Streptococcus pneumoniae-targeted autophagy via pneumolysin, Golgi-resident Rab41, and Nedd4-1 mediated K63-linked ubiquitination. Cell. Microbiol. 20, e12846 [PubMed]
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18-6) Eguchi, T., Kuwahara, T., Sakurai,
M., Komori, T., Fujimoto, T., Ito, G., Yoshimura, S.-I., Harada, A., Fukuda, M.,
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sequentially targeted onto stressed lysosomes and maintain their homeostasis. Proc. Natl. Acad.
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18-7) Zhu, S., Bhat, S., Syan, S., Kuchitsu,
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18-8) Hatta, T., Iemura, S.I.,
Ohishi, T., Nakayama, H., Seimiya, H., Yasuda, T., Iizuka, K., Fukuda, M.,
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i2017”Nj
17-1) Furusawa, K., Asada, A., Urrutia, P., Gonzalez-Billault, C., Fukuda, M.
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17-3) Ishida, M., Marubashi, S. and Fukuda, M. (2017) M-INK, a novel tool for
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17-8) Klein, O., Roded, A., Zur, N., Azouz, N. P., Pasternak, O., Hirschberg,
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17-9) Li, C., Wei, Z., Fan, Y., Huang, W., Su, Y., Li, H., Dong, Z., Fukuda,
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16-1) Hirano, S., Uemura, T., Annoh, H., Fujita, N., Waguri, S., Itoh, T. and
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16-4) Efergan, A., Azouz, N. P., Klein, O., Noguchi, K., Rothenberg, M. E., Fukuda, M. and Sagi-Eisenberg, R. (2016) Rab12 regulates retrograde transport of mast cell secretory granules by interacting with the RILP-dynein complex. J. Immunol. 196, 1091-1101 [PubMed]
16-5) Hashimoto, A., Oikawa, T., Hashimoto, S., Sugino, H., Yoshikawa, A., Otsuka, Y., Handa, H., Onodera, Y., Nam, J.-M., Oneyama, C., Okada, M., Fukuda, M. and Sabe, H. (2016) P53- and mevalonate pathway–driven malignancies require Arf6 for metastasis and drug resistance. J. Cell Biol. 213, 81-95 [PubMed]
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16-7) Marubashi, S., Ohbayashi, N. and Fukuda, M. (2016) A Varp-binding
protein, RACK1, regulates dendrite outgrowth through stabilization of Varp
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16-8) Wankel, B., Ouyang, J., Guo, X., Hadjiolova, K., Miller, J., Liao, Y.,
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R., Tolmachova, T., Seabra, M. C., Fukuda, M., Schaeren-Wiemers, N., Hong, W.
J., Sabatini, D. D., Wu, X.-R., Kong, X., Kreibich, G., Rindler, M. J. and Sun
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